euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

176 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip550 chr1 42483967 42483967 + unknown germline . no 254 HIVEP3
srip658 chr1 49428746 49428746 - unknown germline . no 254 AGBL4
srip826 chr1 56405392 56405392 - unknown germline . no 254 LOC100507652
srip2092 chr1 84833982 84833982 + unknown germline . no 254 UOX
srip2805 chr1 101978984 101978984 - unknown germline . no 254 .
srip3898 chr1 119553359 119553359 + unknown germline . no 254 .
srip4131 chr1 149308428 149308428 + unknown germline . no 254 LOC645262
srip6861 chr1 221827812 221827812 - unknown germline . no 254 .
srip7000 chr1 225272510 225272510 + unknown germline . no 254 DNAH14
srip7470 chr1 249191467 249191467 + unknown germline . no 254 .
srip8113 chr10 23842050 23842050 - unknown germline . no 254 .
srip8459 chr10 25707693 25707693 - unknown germline . no 254 GPR158
srip9817 chr10 82972200 82972200 . unknown germline . no 254 .
srip10588 chr10 91717638 91717638 - unknown germline . no 254 .
srip11842 chr10 124455225 124455225 + unknown germline . no 254 .
srip12249 chr11 7285038 7285038 - unknown germline . no 254 SYT9
srip12555 chr11 15380252 15380252 + unknown germline . no 254 .
srip13828 chr11 33670130 33670130 + unknown germline . no 254 C11orf41
srip15002 chr11 50399973 50399973 - unknown germline . no 254 .
srip15862 chr11 67599056 67599056 + unknown germline . no 254 LOC100421859
srip17192 chr11 94684368 94684368 + unknown germline . no 254 .
srip17664 chr11 104556129 104556129 - unknown germline . no 254 .
srip18134 chr11 111082407 111082407 . unknown germline . no 254 .
srip18236 chr11 112084613 112084613 + unknown germline . no 254 BCO2
srip19272 chr11 134305645 134305645 - unknown germline . no 254 .
srip19611 chr12 8105612 8105612 + unknown germline . no 254 .
srip19883 chr12 11219195 11219195 - unknown germline . no 254 PRH1-PRR4
srip20129 chr12 12933687 12933687 - unknown germline . no 254 APOLD1
srip20754 chr12 28226420 28226420 - unknown germline . no 254 .
srip22201 chr12 43256979 43256979 - unknown germline . no 254 .
srip24406 chr12 84955208 84955208 - unknown germline . no 254 .
srip24923 chr12 85506300 85506300 + unknown germline . no 254 LRRIQ1
srip25106 chr12 95808453 95808453 - unknown germline . no 254 .
srip25658 chr12 117814466 117814466 - unknown germline . no 254 .
srip26083 chr12 118186932 118186932 + unknown germline . no 254 KSR2
srip27361 chr13 27488117 27488117 + unknown germline . no 254 .
srip28443 chr13 58900902 58900902 + unknown germline . no 254 .
srip29084 chr13 61462340 61462340 - unknown germline . no 254 .
srip30314 chr13 72968672 72968672 + unknown germline . no 254 .
srip30641 chr13 78693217 78693217 + unknown germline . no 254 .
srip30973 chr13 79259790 79259790 - unknown germline . no 254 .
srip31450 chr13 85871603 85871603 - unknown germline . no 254 .
srip31994 chr13 86340151 86340151 - unknown germline . no 254 .
srip32316 chr13 91149416 91149416 - unknown germline . no 254 .
srip33024 chr13 99519881 99519881 + unknown germline . no 254 DOCK9
srip33529 chr13 104296230 104296230 - unknown germline . no 254 .
srip35207 chr14 28301256 28301256 + unknown germline . no 254 .
srip35879 chr14 36674752 36674752 + unknown germline . no 254 .
srip38134 chr14 71197781 71197781 + unknown germline . no 254 MAP3K9
srip38642 chr14 86381803 86381803 - unknown germline . no 254 .
srip39344 chr15 28175797 28175797 - unknown germline . no 254 OCA2
srip39744 chr15 37707890 37707890 - unknown germline . no 254 .
srip40241 chr15 47507335 47507335 - unknown germline . no 254 SEMA6D
srip43264 chr15 100931152 100931152 - unknown germline . no 254 .
srip45516 chr16 33992437 33992437 . unknown germline . no 254 .
srip45997 chr16 68757980 68757980 + unknown germline . no 254 .
srip46314 chr16 71028016 71028016 + unknown germline . no 254 HYDIN
srip46519 chr17 4314989 4314989 - unknown germline . no 254 .
srip46828 chr17 15511187 15511187 + unknown germline . no 254 CDRT1
srip47214 chr17 28398310 28398310 + unknown germline . no 254 EFCAB5
srip47704 chr17 32813627 32813627 + unknown germline . no 254 .
srip47895 chr17 34272157 34272157 + unknown germline . no 254 .
srip48360 chr17 68357404 68357404 + unknown germline . no 254 .
srip48969 chr18 15095255 15095255 - unknown germline . no 254 .
srip50029 chr18 49216225 49216225 - unknown germline . no 254 .
srip50358 chr18 51425734 51425734 - unknown germline . no 254 .
srip50391 chr18 51488332 51488332 - unknown germline . no 254 .
srip50743 chr18 51762737 51762737 - unknown germline . no 254 .
srip51523 chr18 73290639 73290639 - unknown germline . no 254 .
srip51830 chr18 74960069 74960069 - unknown germline . no 254 .
srip52437 chr19 45444694 45444694 + unknown germline . no 254 .
srip53480 chr2 23191008 23191008 - unknown germline . no 254 .
srip56220 chr2 82098035 82098035 + unknown germline . no 254 .
srip57493 chr2 124772475 124772475 + unknown germline . no 254 .
srip57739 chr2 129573979 129573979 + unknown germline . no 254 .
srip58237 chr2 141852915 141852915 - unknown germline . no 254 LRP1B
srip59220 chr2 147020925 147020925 + unknown germline . no 254 .
srip59622 chr2 156527837 156527837 + unknown germline . no 254 .
srip60153 chr2 178676252 178676252 - unknown germline . no 254 PDE11A
srip60534 chr2 181000547 181000547 + unknown germline . no 254 .
srip61089 chr2 199779898 199779898 + unknown germline . no 254 .
srip61656 chr2 213114168 213114168 + unknown germline . no 254 ERBB4
srip62635 chr2 235519802 235519802 + unknown germline . no 254 .
srip63466 chr20 16479499 16479499 - unknown germline . no 254 KIF16B
srip63622 chr20 17860932 17860932 + unknown germline . no 254 .
srip64046 chr20 25895497 25895497 - unknown germline . no 254 .
srip64089 chr20 26249103 26249103 + unknown germline . no 254 LOC100287605
srip64786 chr20 41952105 41952105 - unknown germline . no 254 .
srip66924 chr21 29069178 29069178 + unknown germline . no 254 .
srip67880 chr22 26216013 26216013 . unknown germline . no 254 MYO18B
srip68762 chr22 44324597 44324597 - unknown germline . no 254 PNPLA3
srip71912 chr3 38626075 38626075 + unknown germline . no 254 SCN5A
srip72034 chr3 43262677 43262677 + unknown germline . no 254 .
srip73378 chr3 59852896 59852896 + unknown germline . no 254 FHIT
srip77247 chr3 123590719 123590719 + unknown germline . no 254 MYLK
srip77313 chr3 124808636 124808636 . unknown germline . no 254 SLC12A8
srip78658 chr3 151148549 151148549 - unknown germline . no 254 MED12L
srip80359 chr3 176091325 176091325 + unknown germline . no 254 .
srip81500 chr3 186372133 186372133 + unknown germline . no 254 .
srip82104 chr3 193354172 193354172 - unknown germline . no 254 OPA1
srip82352 chr4 9451065 9451065 . unknown germline . no 254 DEFB131
srip82987 chr4 18162684 18162684 - unknown germline . no 254 .
srip84719 chr4 47007787 47007787 - unknown germline . no 254 .
srip85375 chr4 57497058 57497058 - unknown germline . no 254 .
srip86165 chr4 66413931 66413931 + unknown germline . no 254 EPHA5
srip87106 chr4 74243693 74243693 + unknown germline . no 254 .
srip87342 chr4 80768529 80768529 + unknown germline . no 254 GDEP
srip87901 chr4 86607953 86607953 + unknown germline . no 254 ARHGAP24
srip88901 chr4 103343750 103343750 + unknown germline . no 254 .
srip89972 chr4 112628968 112628968 + unknown germline . no 254 .
srip90353 chr4 115132699 115132699 + unknown germline . no 254 .
srip92203 chr4 134596423 134596423 + unknown germline . no 254 .
srip92822 chr4 138177329 138177329 + unknown germline . no 254 .
srip93384 chr4 152732816 152732816 - unknown germline . no 254 .
srip94049 chr4 165231734 165231734 - unknown germline . no 254 MARCH1
srip95429 chr4 190895541 190895541 . unknown germline . no 254 .
srip96980 chr5 23070277 23070277 + unknown germline . no 254 .
srip97753 chr5 33633341 33633341 - unknown germline . no 254 ADAMTS12
srip99519 chr5 68263468 68263468 - unknown germline . no 254 .
srip100713 chr5 89450774 89450774 + unknown germline . no 254 .
srip101088 chr5 96866415 96866415 + unknown germline . no 254 .
srip101689 chr5 105935368 105935368 + unknown germline . no 254 .
srip102779 chr5 115449068 115449068 - unknown germline . no 254 COMMD10
srip102785 chr5 116758578 116758578 - unknown germline . no 254 .
srip103781 chr5 137014782 137014782 - unknown germline . no 254 KLHL3
srip103892 chr5 137130153 137130153 - unknown germline . no 254 .
srip104209 chr5 144331002 144331002 - unknown germline . no 254 .
srip104859 chr5 154873935 154873935 - unknown germline . no 254 .
srip105726 chr5 160435671 160435671 - unknown germline . no 254 .
srip107515 chr6 13503042 13503042 + unknown germline . no 254 .
srip108723 chr6 46310300 46310300 + unknown germline . no 254 .
srip110907 chr6 77980644 77980644 - unknown germline . no 254 .
srip111338 chr6 83678122 83678122 - unknown germline . no 254 UBE2CBP
srip112055 chr6 91669514 91669514 - unknown germline . no 254 .
srip112298 chr6 91767664 91767664 + unknown germline . no 254 .
srip112384 chr6 98096205 98096205 + unknown germline . no 254 .
srip112691 chr6 102283763 102283763 - unknown germline . no 254 GRIK2
srip112802 chr6 102846090 102846090 - unknown germline . no 254 .
srip113497 chr6 130848186 130848186 - unknown germline . no 254 .
srip114773 chr6 148195798 148195798 + unknown germline . no 254 .
srip115687 chr6 162181262 162181262 + unknown germline . no 254 PARK2
srip116207 chr7 10500040 10500040 . unknown germline . no 254 .
srip116257 chr7 12725157 12725157 + unknown germline . no 254 .
srip116624 chr7 27307051 27307051 . unknown germline . no 254 .
srip117019 chr7 42529869 42529869 - unknown germline . no 254 .
srip117462 chr7 52789459 52789459 + unknown germline . no 254 .
srip117916 chr7 57984347 57984347 - unknown germline . no 254 .
srip118300 chr7 62492938 62492938 + unknown germline . no 254 .
srip118882 chr7 70188682 70188682 - unknown germline . no 254 AUTS2
srip119679 chr7 84901723 84901723 - unknown germline . no 254 .
srip120935 chr7 95370803 95370803 + unknown germline . no 254 .
srip121759 chr7 107829256 107829256 + unknown germline . no 254 NRCAM
srip122008 chr7 108325669 108325669 + unknown germline . no 254 .
srip122263 chr7 110484750 110484750 + unknown germline . no 254 IMMP2L
srip124370 chr8 5829282 5829282 - unknown germline . no 254 .
srip125435 chr8 24926547 24926547 - unknown germline . no 254 .
srip127438 chr8 72399228 72399228 - unknown germline . no 254 .
srip128027 chr8 83740686 83740686 + unknown germline . no 254 .
srip128288 chr8 87315042 87315042 + unknown germline . no 254 .
srip129130 chr8 115788572 115788572 - unknown germline . no 254 .
srip131085 chr9 6290487 6290487 + unknown germline . no 254 .
srip131397 chr9 8344967 8344967 + unknown germline . no 254 PTPRD
srip131737 chr9 19671056 19671056 . unknown germline . no 254 SLC24A2
srip132863 chr9 32092741 32092741 - unknown germline . no 254 .
srip133395 chr9 32463891 32463891 - unknown germline . no 254 DDX58
srip136275 chrX 4659603 4659603 - unknown germline . no 254 .
srip137236 chrX 54917144 54917144 + unknown germline . no 254 .
srip137345 chrX 55264659 55264659 - unknown germline . no 254 .
srip137573 chrX 55585154 55585154 - unknown germline . no 254 .
srip138345 chrX 66982759 66982759 - unknown germline . no 254 .
srip139760 chrX 98264295 98264295 - unknown germline . no 254 .
srip140807 chrX 119892837 119892837 - unknown germline . no 254 .
srip141061 chrX 122664864 122664864 - unknown germline . no 254 .
srip141372 chrX 129525275 129525275 - unknown germline . no 254 .
srip141974 chrX 140515265 140515265 - unknown germline . no 254 .
srip142279 chrY 13490336 13490336 + unknown germline . no 254 .